Software Applications

The primary use of LoBoS is to allow computational chemistry applications to be run in a massively parallel environment. The most common applications to date have been quantum and classical simulations of biological systems, neural network analysis of experimental neuron signal data and parallelization methods development.

Application Software

CHARMM Molecular Modeling documentation
CHARMM Home Page
AMBER Molecular Modeling documentation
AMBER Home Page
GAMESS-UK Ab initio documentation (at Daresbury Labs)
GAMESS-UK Home Page
GAMESS (US) Ab initio documentation
GAMESS (US) Home Page

Enabling Parallelization Software

MPI Message Passing Interface Standard MPICH Home Page
MP_Lite Home Page
VIA Virtual Interface Architecture Standard M-VIA Implementation
Intel - VI Architecture

Compilers

PGI documentation
Portland Group, Inc. Home page
MySQL MySQL Home Page

Operating System Software

Linux Freely available and robust implementation of UNIX
RedHat distribution
Debian distribution